Gene

synprb

ID

ZDB-GENE-030616-625

Name

synaptoporin b

Symbol

synprb Nomenclature History

Previous Names

synpr
si:ch211-263a23.1
si:zc263a23.1
wu:fq14d10

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have syntaxin-1 binding activity. Predicted to localize to synaptic vesicle membrane. Is expressed in epiphysis; female organism; forebrain; and male organism. Orthologous to human SYNPR (synaptoporin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With synprb Human Ortholog

No data available

Associated With synprb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR008253	Marvel domain
Family	IPR001285	Synaptophysin/synaptoporin

Domain Details Per Protein

Protein	Length	Marvel domain	Synaptophysin/synaptoporin
UniProtKB:Q801U9 InterPro	283

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	synpr-201 (1) Ensembl	Ensembl		1,410 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations