Gene

acin1a

ID

ZDB-GENE-030616-583

Name

apoptotic chromatin condensation inducer 1a

Symbol

acin1a Nomenclature History

Previous Names

acinusa (1)
acinusl
fc12e10
ik:tdsubc_2g5
si:zc14a17.12
wu:fb04g06 (1)
wu:fb40f03
wu:fb68h03
wu:fb80f07
wu:fc12e10
xx:tdsubc_2g5

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Predicted to have nucleic acid binding activity. Orthologous to human ACIN1 (apoptotic chromatin condensation inducer 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7150749 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With acin1a Human Ortholog

No data available

Associated With acin1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR032552	Acin1, RNSP1-SAP18 binding (RSB) motif
Domain	IPR003034	SAP domain
Domain	IPR034257	Acinus, RNA recognition motif
Family	IPR052793	Exon junction complex-associated protein
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily
Homologous_superfamily	IPR036361	SAP domain superfamily

Domain Details Per Protein

Protein	Length	Acin1, RNSP1-SAP18 binding (RSB) motif	Acinus, RNA recognition motif	Exon junction complex-associated protein	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	SAP domain	SAP domain superfamily
UniProtKB:A0A8M2BIP8 InterPro	1928
UniProtKB:A0A8M2BIJ9 InterPro	1929
UniProtKB:A0A8M9Q0P4 InterPro	1951
UniProtKB:A0A8M2BJ22 InterPro	1427
UniProtKB:A0A8M3AQD0 InterPro	1426
UniProtKB:A0A8M2BIM2 InterPro	1484
UniProtKB:A0A8M9PJ00 InterPro	1449
UniProtKB:A0A8M9PQ02 InterPro	1448
UniProtKB:A0A8M9PXD0 InterPro	1950
UniProtKB:A0A8M9P831 InterPro	1506

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	acin1a-202 (1) Ensembl	Ensembl	3,315 nt	Select Tool
mRNA	acin1a-204 (1) Ensembl	Ensembl	2,378 nt	Select Tool
mRNA	acin1a-205 (1) Ensembl	Ensembl	806 nt	Select Tool
mRNA	acin1a-206 (1) Ensembl	Ensembl	779 nt	Select Tool
mRNA	acin1a-207 (1) Ensembl	Ensembl	2,523 nt	Select Tool
mRNA	acin1a-208 (1) Ensembl	Ensembl	4,158 nt	Select Tool
ncRNA	acin1a-003 (1) Ensembl	Ensembl	508 nt	Select Tool
ncRNA	acin1a-011 (1) Ensembl	Ensembl	803 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations