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ZIRC
ZFIN ID: ZDB-GENE-030318-1
Gene Name: chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
Gene Symbol: cxcl12a
Sequence Ontology ID : SO:0000704

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Previous Names: cxcl12 (1), SDF-1 (1), sdf-1a (1), sdf1a (1), unm t30516, unm_t30516, wu:fa55e10 (1), wu:fc16h12 (1), wu:fj84c02 (1)

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits chemoattractant activity; involved in several processes, including animal organ development, nervous system development, and regulation of cell motility; predicted to localize to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12849 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35516 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • t30516 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • u766 Unknown Unknown Unknown
    Targeting reagents:
    DISEASE ASSOCIATED WITH cxcl12a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    {AIDS, resistance to} 609423
    DISEASE ASSOCIATED WITH cxcl12a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process fin regeneration (more)
    Cellular Component extracellular region (more)
    Molecular Function chemoattractant activity (more)
    GO Terms (all 35)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cxcl12a-201 (1) 3041
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    cxcl12aContained in: [BAC] DKEY-228B19 (1) (order this)
    cxcl12aContains: [STS] chunp30664
    cxcl12aEncodes: [EST] fa55e10, fc16h12
    [cDNA] MGC:123091 (1) (order this)
    cxcl12aIs Hybridized by: [EST] fj84c02
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_178307 (1) 1521bp
    Genomic GenBank:CR762493 (1) 168643bp
    Select Tool
    Polypeptide UniProtKB:Q8AV10 (1) 99aa
    Sequence Clusters UniGene:99352 (1)
    Sequence Information (all 22)
    ORTHOLOGY for cxcl12a (Chr: 13)
    CITATIONS (165)