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ZIRC
ZFIN ID: ZDB-GENE-030219-109
Gene Name: BOP1 ribosomal biogenesis factor
Gene Symbol: bop1
Sequence Ontology ID : SO:0001217

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Previous Names: id:ibd1283 (1), si:ch211-251g8.2, si:ch211-251g8.4, zgc:154135

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ribonucleoprotein complex binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and regulation of  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 2 figures (2 images) from Kudoh et al., 2001 [ibd1283]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Pharyngula:Prim-15 (30.0h-36.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013474Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la020785Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23413 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36754 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH bop1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH bop1 VIA EXPERIMENTAL MODELS No data available
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bop1-201 (1) 3259
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM bop1 No data available
    MARKER RELATIONSHIPS
    bop1 Contained in: [BAC] CH211-251G8 (1) (order this)
    bop1 Encodes: [EST] ibd1283 (order this)
    [cDNA] MGC:154135 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077735 (1) 2855 bp
    Genomic GenBank:BX255894 (1) 180950 bp
    Select Tool
    Polypeptide UniProtKB:G3N3Y4 (1) 785 aa
    Sequence Clusters UniGene:12295 (1)
    Sequence Information (all 13)
    ORTHOLOGY for bop1 ( Chr: 19 )
    CITATIONS (31)