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Gene

bop1

ID
ZDB-GENE-030219-109
Name
BOP1 ribosomal biogenesis factor
Symbol
bop1 Nomenclature History
Previous Names
  • id:ibd1283 (1)
  • si:ch211-251g8.2
  • si:ch211-251g8.4
  • zgc:154135
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to enable ribonucleoprotein complex binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and regulation of cell cycle. Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of PeBoW complex and preribosome, large subunit precursor. Is expressed in head; immature eye; midbrain hindbrain boundary; optic tectum; and somite. Orthologous to human BOP1 (BOP1 ribosomal biogenesis factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With bop1 Human Ortholog
No data available
Associated With bop1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR012953 BOP1, N-terminal domain
Domain IPR017986 WD40-repeat-containing domain
Family IPR028598 WD repeat BOP1/Erb1
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Domain Details Per Protein
Protein Length BOP1, N-terminal domain WD40 repeat WD40 repeat, conserved site WD40-repeat-containing domain WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily WD repeat BOP1/Erb1
UniProtKB:G3N3Y4 785
UniProtKB:A0JMQ0 777
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations