Gene

wdr3

ID
ZDB-GENE-030131-9830
Name
WD repeat domain 3
Symbol
wdr3 Nomenclature History
Previous Names
  • sb:cb42
  • wu:fb92b07
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have snoRNA binding activity. Predicted to be involved in maturation of SSU-rRNA. Predicted to localize to Pwp2p-containing subcomplex of 90S preribosome and small-subunit processome. Is expressed in several structures, including alar plate midbrain region; digestive system; immature eye; midbrain; and retina. Human ortholog(s) of this gene implicated in thyroid gland papillary carcinoma. Orthologous to human WDR3 (WD repeat domain 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With wdr3 Human Ortholog
No data available
Associated With wdr3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR007148 Small-subunit processome, Utp12
Domain IPR024977 Anaphase-promoting complex subunit 4-like, WD40 domain
Family IPR051570 TBC1 domain family involved in cilium biogenesis
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
Domain Details Per Protein
Protein Length Anaphase-promoting complex subunit 4-like, WD40 domain G-protein beta WD-40 repeat Small-subunit processome, Utp12 TBC1 domain family involved in cilium biogenesis WD40 repeat WD40 repeat, conserved site WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:Q6PFM8 938
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA wdr3-201 (1) Ensembl 3,058 nt
mRNA wdr3-205 (1) Ensembl 401 nt
ncRNA wdr3-002 (1) Ensembl 560 nt
ncRNA wdr3-003 (1) Ensembl 813 nt
ncRNA wdr3-004 (1) Ensembl 734 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations