Gene

snu13b

ID
ZDB-GENE-030131-9670
Name
SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5)
Symbol
snu13b Nomenclature History
Previous Names
  • cb127 (1)
  • nhp2l1 (1)
  • nhp2l1b
  • sb:cb127
  • zgc:56265
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Involved in somite development. Predicted to localize to nucleus and small-subunit processome. Is expressed in several structures, including alar plate midbrain region; immature eye; mesoderm; nervous system; and pectoral fin musculature. Orthologous to human SNU13 (small nuclear ribonucleoprotein 13).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2001
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Johnson et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With snu13b Human Ortholog
No data available
Associated With snu13b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR004037 Large ribosomal subunit protein eL8-like, conserved site
Domain IPR004038 Ribosomal protein eL8/eL30/eS12/Gadd45
Family IPR002415 H/ACA ribonucleoprotein complex, subunit Nhp2-like
Family IPR018492 Ribosomal protein eL8/Nhp2 family
Homologous_superfamily IPR029064 Ribosomal protein eL30-like superfamily
Domain Details Per Protein
Protein Length H/ACA ribonucleoprotein complex, subunit Nhp2-like Large ribosomal subunit protein eL8-like, conserved site Ribosomal protein eL30-like superfamily Ribosomal protein eL8/eL30/eS12/Gadd45 Ribosomal protein eL8/Nhp2 family
UniProtKB:Q7ZV23 128
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA snu13b-201 (1) Ensembl 761 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations