Gene

smarce1

ID
ZDB-GENE-030131-967
Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Symbol
smarce1 Nomenclature History
Previous Names
  • baf57 (1)
  • fb33d02
  • fb54d11
  • wu:fb33d02 (1)
  • wu:fb54d11 (1)
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have nuclear receptor binding activity. Involved in endocardium morphogenesis. Predicted to localize to SWI/SNF complex. Human ortholog(s) of this gene implicated in familial meningioma. Orthologous to human SMARCE1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smarce1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Coffin-Siris syndrome 5 616938
{Meningioma, familial, susceptibility to} 607174
Associated With smarce1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR009071 High mobility group box domain
Family IPR030089 SWI/SNF complex subunit BAF57
Homologous_superfamily IPR036910 High mobility group box domain superfamily
Domain Details Per Protein
Protein Length High mobility group box domain High mobility group box domain superfamily SWI/SNF complex subunit BAF57
UniProtKB:Q803S1 420
UniProtKB:F1Q5P8 406
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations