Gene

pabpc4

ID

ZDB-GENE-030131-9663

Name

poly(A) binding protein, cytoplasmic 4 (inducible form)

Symbol

pabpc4 Nomenclature History

Previous Names

cb12 (1)
sb:cb12

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to have mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Predicted to localize to several cellular components, including cytoplasmic stress granule; cytosol; and ribonucleoprotein complex. Is expressed in eye; musculature system; solid lens vesicle; and somite. Orthologous to several human genes including PABPC4 (poly(A) binding protein cytoplasmic 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

17 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb12 (5 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pabpc4 Human Ortholog

No data available

Associated With pabpc4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein
Domain	IPR003954	RNA recognition motif domain, eukaryote
Domain	IPR034364	PABP, RNA recognition motif 1
Domain	IPR045305	PABP, RNA recognition motif 2
Family	IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily
Homologous_superfamily	IPR036053	PABC (PABP) domain