Gene

pspc1

ID
ZDB-GENE-030131-9530
Name
paraspeckle component 1
Symbol
pspc1 Nomenclature History
Previous Names
  • fj85a06
  • wu:fj85a06 (1)
  • zgc:136470 (1)
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome; regulation of circadian rhythm; and regulation of transcription, DNA-templated. Predicted to localize to nucleus. Orthologous to human PSPC1 (paraspeckle component 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pspc1 Human Ortholog
No data available
Associated With pspc1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR012975 NOPS
Domain IPR034522 PSP1, RNA recognition motif 1
Domain IPR034523 PSP1, RNA recognition motif 2
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length NOPS Nucleotide-binding alpha-beta plait domain superfamily PSP1, RNA recognition motif 1 PSP1, RNA recognition motif 2 RNA-binding domain superfamily RNA recognition motif domain
UniProtKB:Q1JPY8 512
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA pspc1-202 (1) Havana 1619 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations