Gene

btf3

ID

ZDB-GENE-030131-8731

Name

basic transcription factor 3

Symbol

btf3 Nomenclature History

Previous Names

wu:fb05d06
zgc:153435 (1)

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to localize to cytosol; nascent polypeptide-associated complex; and polysomal ribosome. Orthologous to human BTF3 (basic transcription factor 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7144045 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With btf3 Human Ortholog

No data available

Associated With btf3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002715	Nascent polypeptide-associated complex NAC domain
Family	IPR039370	Transcription factor BTF3
Homologous_superfamily	IPR038187	NAC A/B domain superfamily

Domain Details Per Protein

Protein	Length	NAC A/B domain superfamily	Nascent polypeptide-associated complex NAC domain	Transcription factor BTF3
UniProtKB:Q08C78 InterPro	162
UniProtKB:A0A8M2BJ89 InterPro	163
UniProtKB:A0A8M2BJ50 InterPro	196

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	btf3-201 (1) Ensembl	Ensembl	894 nt	Select Tool
mRNA	btf3-202 (1) Ensembl	Ensembl	954 nt	Select Tool
mRNA	btf3-203 (1) Ensembl	Ensembl	972 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations