Gene
si:dkey-169i5.4
- ID
- ZDB-GENE-030131-8695
- Name
- si:dkey-169i5.4
- Symbol
- si:dkey-169i5.4 Nomenclature History
- Previous Names
-
- fa94f04
- wu:fa94f04 (1)
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Description
- Predicted to be involved in several processes, including cell surface receptor signaling pathway; cellular response to lipopolysaccharide; and regulation of T cell activation. Predicted to be located in plasma membrane. Predicted to be active in external side of plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| la014233Tg | Transgenic insertion | Unknown | Unknown | DNA | |
| la022315Tg | Transgenic insertion | Unknown | Unknown | DNA | |
| sa37549 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Family | IPR051713 | T-cell Activation and Immune Regulation Protein |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain | T-cell Activation and Immune Regulation Protein |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AMF7 | InterPro | 176 | ||||||
| UniProtKB:A5PMQ7 | InterPro | 161 | ||||||
| UniProtKB:A0AB32TGE9 | InterPro | 211 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-169i5.4-201
(1)
|
Ensembl | 1,501 nt | ||
| mRNA |
si:dkey-169i5.4-202
(1)
|
Ensembl | 1,291 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-169I5 | ZFIN Curated Data | |
| Encodes | EST | fa94f04 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001126460 (1) | 1501 nt | ||
| Genomic | GenBank:BX649448 (2) | 184512 nt | ||
| Polypeptide | UniProtKB:A0AB32TGE9 (1) | 211 aa |
No data available
- Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S. (2013) A large-scale zebrafish gene knockout resource for the genome-wide study of gene function. Genome research. 23(4):727-735
- Wang, D., Jao, L.E., Zheng, N., Dolan, K., Ivey, J., Zonies, S., Wu, X., Wu, K., Yang, H., Meng, Q., Zhu, Z., Zhang, B., Lin, S., and Burgess, S.M. (2007) Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions. Proceedings of the National Academy of Sciences of the United States of America. 104(30):12428-12433
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