ZFIN is now using GRCz12tu for Genomic Data
Gene
nup62l
- ID
- ZDB-GENE-030131-8491
- Name
- nucleoporin 62 like
- Symbol
- nup62l Nomenclature History
- Previous Names
-
- fb13d02
- wu:fb13d02 (1)
- zgc:172056
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable phospholipid binding activity. Predicted to be a structural constituent of nuclear pore. Predicted to be involved in RNA export from nucleus and protein import into nucleus. Predicted to be part of nuclear pore central transport channel. Is expressed in several structures, including brain; head; intestine; pectoral fin; and pectoral fin bud. Human ortholog(s) of this gene implicated in primary biliary cholangitis and striatonigral degeneration. Orthologous to human NUP62 (nucleoporin 62).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Yang et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 10 figures from 2 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleoporin, NSP1-like, C-terminal | Nucleoporin NSP1/NUP62 |
|---|---|---|---|---|
| UniProtKB:A8WFZ2 | InterPro | 507 | ||
| UniProtKB:E9QIQ3 | InterPro | 507 | ||
| UniProtKB:A0AC58H6G3 | InterPro | 260 | ||
| UniProtKB:A0ACD6B5A8 | InterPro | 507 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
nup62l-201
(1)
|
Ensembl | 1,893 nt | ||
| mRNA |
nup62l-202
(1)
|
Ensembl | 775 nt | ||
| mRNA |
nup62l-203
(1)
|
Ensembl | 878 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers