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Gene

hmgb1b

ID
ZDB-GENE-030131-8480
Name
high mobility group box 1b
Symbol
hmgb1b Nomenclature History
Previous Names
  • si:dkey-1m11.1
  • wu:fa96c07
  • wu:fb13a05
  • zgc:165618
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to enable DNA binding activity, bending. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in chromosome and nucleus. Is expressed in several structures, including axis; digestive system; intermediate cell mass of mesoderm; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis. Orthologous to human HMGB1 (high mobility group box 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
15 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hmgb1b Human Ortholog
No data available
Associated With hmgb1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017967 HMG box A DNA-binding domain, conserved site
Domain IPR009071 High mobility group box domain
Homologous_superfamily IPR036910 High mobility group box domain superfamily
Domain Details Per Protein
Protein Length High mobility group box domain High mobility group box domain superfamily HMG box A DNA-binding domain, conserved site
UniProtKB:X1WFI9 197
UniProtKB:X1WHQ3 87
UniProtKB:A6H8T4 165
UniProtKB:X1WDG2 166
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations