Gene
col10a1a
- ID
- ZDB-GENE-030131-8373
- Name
- collagen, type X, alpha 1a
- Symbol
- col10a1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Predicted to be an extracellular matrix structural constituent. Acts upstream of or within fin regeneration. Predicted to be located in extracellular region. Predicted to be part of collagen type IX trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including fin; mesenchymal cell; osteoblast; osteoprogenitor cell; and skeletal system. Human ortholog(s) of this gene implicated in Schmid metaphyseal chondrodysplasia and osteochondrodysplasia. Orthologous to human COL10A1 (collagen type X alpha 1 chain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 83 figures from 60 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Schmid metaphyseal chondrodysplasia | Alliance | Metaphyseal chondrodysplasia, Schmid type | 156500 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | C1q domain | Collagen superfamily | Collagen triple helix repeat | Tumour necrosis factor-like domain superfamily |
|---|---|---|---|---|---|
|
UniProtKB:A2RQR3
|
655 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
col10a1a-201
(1)
|
Ensembl | 2,639 nt |
Interactions and Pathways
No data available
Plasmids
No data available