ZFIN ID: ZDB-GENE-030131-8308
Gene Name: calmodulin 1a
Gene Symbol: calm1a    Nomenclature History

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Previous Names: CALMx2 (1), CaMbeta (1), sb:cb617, wu:fb08d09, wu:fb69c08, wu:fj34a08, zgc:63926

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Involved in midbrain-hindbrain boundary morphogenesis. Is expressed in several structures, including mesoderm; midbrain neural keel; nervous system; neural tube; and trigeminal placode. Human ortholog(s) of this gene implicated in catecholaminergic polymorphic ventricular tachycardia 4 and long QT syndrome 14. Orthologous to human CALM1 (calmodulin 1).
Genome Resources: Alliance (1),  Gene:406660 (1), 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa8778 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-calm1a N/A 1
    DISEASE ASSOCIATED WITH calm1a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    catecholaminergic polymorphic ventricular tachycardia 4 Alliance Ventricular tachycardia, catecholaminergic polymorphic, 4 614916
    long QT syndrome 14 Alliance Long QT syndrome 14 616247
    DISEASE ASSOCIATED WITH calm1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process midbrain-hindbrain boundary morphogenesis (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA calm1a-201 (1)    Ensembl 1576
    ncRNA calm1a-002 (1)    Ensembl 520
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM calm1a No data available
    MARKER RELATIONSHIPS
    calm1a Contained in: [BAC] CH211-220O11 (1)
    calm1a Contains: [STS] chunp30372
    calm1a Encodes: [EST] cb617 (1) (order this), fb08d09, fb69c08, fj34a08
    [cDNA] MGC:63926 (1), MGC:113986 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213351 (1) 1597 nt
    Genomic GenBank:AL928712 (1) 137441 nt
    Select Tool
    Polypeptide RefSeq:NP_998516 (1) 149 aa
    Sequence Information (all 21)
    ORTHOLOGY for calm1a ( Chr: 17 )
    CITATIONS (22)