Gene

bco2a

ID

ZDB-GENE-030131-8039

Name

beta-carotene oxygenase 2a

Symbol

bco2a Nomenclature History

Previous Names

bco2b (1)
fj48c03
wu:fj48c03

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have beta-carotene 15,15'-monooxygenase activity; carotenoid dioxygenase activity; and retinal isomerase activity. Predicted to be involved in carotene catabolic process. Predicted to localize to mitochondrion. Orthologous to human BCO2 (beta-carotene oxygenase 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With bco2a Human Ortholog

No data available

Associated With bco2a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR004294	Carotenoid oxygenase
Homologous_superfamily	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily

Domain Details Per Protein

Protein	Length	Carotenoid oxygenase	Quinoprotein alcohol dehydrogenase-like superfamily
UniProtKB:F1QU45 InterPro	572

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	bco2a-201 (1) Ensembl	Ensembl	6,142 nt	Select Tool ZFIN BLAST
mRNA	bco2a-202 (1) Ensembl	Ensembl	1,055 nt	Select Tool ZFIN BLAST
mRNA	bco2a-203 (1) Ensembl	Ensembl	830 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations