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ZIRC
ZFIN ID: ZDB-GENE-030131-7949
Gene Name: SPT6 homolog, histone chaperone and transcription elongation factor
Gene Symbol: supt6h
Sequence Ontology ID : SO:0000704

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Previous Names: pan, Spt6 (1), pandora, wu:fj42h11

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have histone binding activity and nucleosome binding activity; involved in several processes, including animal organ development, negative regulation of histone H3-K27 methylation, and  ...
GENE EXPRESSION
All Expression Data: text only from Keegan et al., 2002
Wild-type Stages, Structures: Blastula:512-cell (2.75h-3.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1621Tg Transgenic Insertion Intron 25 Unknown DNA
hi2505bTg Transgenic Insertion 5' UTR Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014035Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la021916Tg Transgenic Insertion Unknown Unknown DNA
    m313 Point Mutation Unknown Splice Site, Intron Gain, Frameshift, Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16076 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16191 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23947 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37322 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37323 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sbu2 Point Mutation Exon 30 Premature Stop ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH supt6h HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH supt6h VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic heart tube development (more)
    Cellular Component nucleus (more)
    Molecular Function histone binding (more)
    GO Terms (all 21)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA supt6h-201 (1) 6394
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM supt6h No data available
    MARKER RELATIONSHIPS
    supt6hContained in: [BAC] DKEY-220H13 (1) (order this), DKEYP-6A12 (1)
    supt6hEncodes: [EST] fj42h11
    [cDNA] MGC:63881 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_145118 (1) 6340bp
    Genomic GenBank:BX294122 (1) 162708bp
    Select Tool
    Polypeptide UniProtKB:Q8UVK2 (1) 1726aa
    Sequence Clusters UniGene:81053 (1)
    Sequence Information (all 19)
    ORTHOLOGY for supt6h (Chr: 21)
    CITATIONS (49)