ZFIN is now using GRCz12tu for Genomic Data
Gene
safb
- ID
- ZDB-GENE-030131-698
- Name
- scaffold attachment factor B
- Symbol
- safb Nomenclature History
- Previous Names
-
- wu:fb40a03
- wu:fd42g06
- zgc:55387
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA binding activity and RNA binding activity. Predicted to be active in nucleus. Orthologous to several human genes including SAFB (scaffold attachment factor B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR003034 | SAP domain |
| Domain | IPR034781 | Scaffold attachment factor B1/2, RNA binding domain |
| Family | IPR051738 | Scaffold Attachment Factor and Modulators |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
| Homologous_superfamily | IPR036361 | SAP domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | SAP domain | SAP domain superfamily | Scaffold Attachment Factor and Modulators | Scaffold attachment factor B1/2, RNA binding domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q803X6 | InterPro | 855 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers