ZFIN is now using GRCz12tu for Genomic Data
Gene
calcoco1a
- ID
- ZDB-GENE-030131-6911
- Name
- calcium binding and coiled-coil domain 1a
- Symbol
- calcoco1a Nomenclature History
- Previous Names
-
- calcoco1
- fa11a10
- wu:fa11a10 (1)
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and nucleus. Orthologous to human CALCOCO1 (calcium binding and coiled-coil domain 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Calcium binding and coiled-coil domain-like | SKICH domain | Ubiquitin-binding and autophagy-associated domain-containing protein |
|---|---|---|---|---|---|
| UniProtKB:A2BGD5 | InterPro | ||||
| UniProtKB:A0A0R4IFJ0 | InterPro | 651 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
calcoco1a-201
(1)
|
Ensembl | 3,327 nt | ||
| mRNA |
calcoco1a-203
(1)
|
Ensembl | 2,224 nt | ||
| ncRNA |
calcoco1a-002
(1)
|
Ensembl | 620 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers