ZFIN is now using GRCz12tu for Genomic Data
Gene
hnrnpm
- ID
- ZDB-GENE-030131-6898
- Name
- heterogeneous nuclear ribonucleoprotein M
- Symbol
- hnrnpm Nomenclature History
- Previous Names
-
- si:ch211-197g15.1
- wu:fa10g07 (1)
- wu:fa98b02
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable mRNA binding activity. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human HNRNPM (heterogeneous nuclear ribonucleoprotein M).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2005
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu1037 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR034990 | hnRNPM, RNA recognition motif 3 |
| Family | IPR050374 | RRT5/SRSF/Splicing Factor SR |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | hnRNPM, RNA recognition motif 3 | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | RRT5/SRSF/Splicing Factor SR |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BHT4 | InterPro | 614 | |||||
| UniProtKB:A0A8M1NZJ3 | InterPro | 686 | |||||
| UniProtKB:F1R2E0 | InterPro | 715 | |||||
| UniProtKB:E9QEE4 | InterPro | 701 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hnrnpm-201
(1)
|
Ensembl | 5,187 nt | ||
| mRNA |
hnrnpm-202
(1)
|
Ensembl | 2,559 nt | ||
| mRNA |
hnrnpm-204
(1)
|
Ensembl | 703 nt | ||
| mRNA |
hnrnpm-206
(1)
|
Ensembl | 2,274 nt | ||
| ncRNA |
hnrnpm-003
(1)
|
Ensembl | 947 nt | ||
| ncRNA |
hnrnpm-004
(1)
|
Ensembl | 796 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers