Gene
trmt2a
- ID
- ZDB-GENE-030131-6876
- Name
- tRNA methyltransferase 2 homolog A
- Symbol
- trmt2a Nomenclature History
- Previous Names
-
- fa10b06
- htf9c (1)
- wu:fa10b06
- zgc:55519
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to have RNA binding activity and RNA methyltransferase activity. Predicted to be involved in RNA processing and methylation. Is expressed in several structures, including cerebellum; digestive system; midbrain; pectoral fin musculature; and retina. Orthologous to human TRMT2A (tRNA methyltransferase 2 homolog A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55519 (6 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Active_site | IPR030390 | RNA methyltransferase TrmA, active site |
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR034262 | TRMT2A, RNA recognition motif |
| Family | IPR010280 | (Uracil-5)-methyltransferase family |
| Family | IPR045850 | tRNA (uracil(54)-C(5))-methyltransferase, metazoa type |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA methyltransferase TrmA, active site | RNA recognition motif domain | S-adenosyl-L-methionine-dependent methyltransferase superfamily | TRMT2A, RNA recognition motif | tRNA (uracil(54)-C(5))-methyltransferase, metazoa type | (Uracil-5)-methyltransferase family |
|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q7ZVY1
|
619 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trmt2a-201
(1)
|
Ensembl | 2,095 nt | ||
| mRNA |
trmt2a-203
(1)
|
Ensembl | 2,192 nt | ||
| ncRNA |
trmt2a-002
(1)
|
Ensembl | 732 nt |
Interactions and Pathways
No data available
Plasmids
No data available