ZFIN ID: ZDB-GENE-030131-667
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
Gene Symbol: ddx46
Sequence Ontology ID : SO:0000704

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Previous Names: fb39a03, fj67d06, wu:fb39a03 (1), wu:fj67d06

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity, RNA binding activity, and helicase activity; involved in several processes, including animal organ development, digestive system development, and positive  ...
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ha4 Point Mutation Unknown Unknown ENU
hi2137Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014107Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15606 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37388 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37389 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 14 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH ddx46 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ddx46 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process brain development (more)
    Cellular Component Cajal body (more)
    Molecular Function ATP binding (more)
    GO Terms (all 25)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000629 (1)
  • InterPro:IPR001650 (1)
  • InterPro:IPR011545 (1)
  • InterPro:IPR014001 (1)
  • InterPro:IPR014014 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00039 (1)
  • PROSITE:PS51192 (1)
  • PROSITE:PS51194 (1)
  • PROSITE:PS51195 (1)
  • Pfam:PF00270 (1)
  • Pfam:PF00271 (1)
  • EC:3.6.4.13 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ddx46-001 (1) 3716
    aberrant processed transcript ddx46-002 (1) 757
    mRNA ddx46-003 (1) 3247
    ddx46-004 (1) 637
    ncRNA ddx46-005 (1) 393
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ddx46 No data available
    MARKER RELATIONSHIPS
    ddx46Contained in: [BAC] CH211-25G7 (1) (order this)
    ddx46Encodes: [EST] fb39a03, fj67d06
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024817 (1) 3247bp
    Genomic GenBank:CU302316 (1) 166312bp
    Select Tool
    Polypeptide UniProtKB:A3KMS1 (1) 1032aa
    Sequence Clusters UniGene:75190 (1)
    Sequence Information (all 19)
    OTHER ddx46 GENE PAGES
  • Alliance (1)
  • Gene:321948 (1)
  • VEGA:OTTDARG00000039634 (1)
  • Ensembl(GRCz11):ENSDARG00000099458 (1)
  • ORTHOLOGY for ddx46 (Chr: 21)
    CITATIONS (30)