ZFIN is now using GRCz12tu for Genomic Data
Gene
sec24b
- ID
- ZDB-GENE-030131-6565
- Name
- SEC24 homolog B, COPII coat complex component
- Symbol
- sec24b Nomenclature History
- Previous Names
-
- wu:fa16f04
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable SNARE binding activity and zinc ion binding activity. Predicted to be involved in COPII-coated vesicle cargo loading. Predicted to be located in ER to Golgi transport vesicle membrane; cytosol; and endoplasmic reticulum membrane. Predicted to be part of COPII vesicle coat. Predicted to be active in endoplasmic reticulum exit site. Orthologous to human SEC24B (SEC24 homolog B, COPII component).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR006895 | Zinc finger, Sec23/Sec24-type |
| Domain | IPR006896 | Sec23/Sec24, trunk domain |
| Domain | IPR006900 | Sec23/Sec24, helical domain |
| Domain | IPR007123 | Gelsolin-like domain |
| Domain | IPR012990 | Sec23/Sec24 beta-sandwich |
| Domain | IPR041742 | Sec24-like, trunk domain |
| Family | IPR050550 | SEC23/SEC24 family, SEC24 subfamily |
| Homologous_superfamily | IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| Homologous_superfamily | IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| Homologous_superfamily | IPR036175 | Sec23/Sec24 helical domain superfamily |
| Homologous_superfamily | IPR036180 | Gelsolin-like domain superfamily |
| Homologous_superfamily | IPR036465 | von Willebrand factor A-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | ADF-H/Gelsolin-like domain superfamily | Gelsolin-like domain | Gelsolin-like domain superfamily | Sec23/Sec24 beta-sandwich | SEC23/SEC24 family, SEC24 subfamily | Sec23/Sec24, helical domain | Sec23/Sec24 helical domain superfamily | Sec23/Sec24, trunk domain | Sec24-like, trunk domain | von Willebrand factor A-like domain superfamily | Zinc finger, Sec23/Sec24-type | Zinc finger, Sec23/Sec24-type superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A2R8QCB9 | InterPro | 1147 | ||||||||||||
| UniProtKB:E7F715 | InterPro | 1184 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sec24b-201
(1)
|
Ensembl | 6,721 nt | ||
| mRNA |
sec24b-202
(1)
|
Ensembl | 1,919 nt | ||
| mRNA |
sec24b-204
(1)
|
Ensembl | 421 nt | ||
| mRNA |
sec24b-205
(1)
|
Ensembl | 6,610 nt | ||
| ncRNA |
sec24b-002
(1)
|
Ensembl | 423 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers