Gene

synj2bp

ID
ZDB-GENE-030131-6531
Name
synaptojanin 2 binding protein
Symbol
synj2bp Nomenclature History
Previous Names
  • fa14c06
  • wu:fa14c06 (1)
  • zgc:56207 (1)
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to be located in membrane. Orthologous to human SYNJ2BP (synaptojanin 2 binding protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa24940Allele with one point mutationUnknownPremature StopENU
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With synj2bp Human Ortholog
No data available
Associated With synj2bp Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001478 PDZ domain
Family IPR050614 Synaptic Scaffolding LAP/MAGUK Families
Homologous_superfamily IPR036034 PDZ superfamily
1 - 3 of 3
Domain Details Per Protein
Protein Additional Resources Length PDZ domain PDZ superfamily Synaptic Scaffolding LAP/MAGUK Families
UniProtKB:Q7ZV59 InterPro 152
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 13
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA synj2bp-201 (1) Ensembl 1,273 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-313O21ZFIN Curated Data
Contained inBACCH211-67F24ZFIN Curated Data
EncodesESTfa14c06
EncodescDNAMGC:56207ZFIN Curated Data
1 - 4 of 4
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSYNJ2BP14
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseSynj2bp12
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
1 - 3 of 3
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