ZFIN is now using GRCz12tu for Genomic Data
Gene

akap13b

ID
ZDB-GENE-030131-6253
Name
A-kinase anchoring protein 13b
Symbol
akap13b Nomenclature History
Previous Names
  • akap13
  • si:dkey-187e18.1
  • wu:fi15d04
  • wu:fi40d09 (1)
  • XLOC_170573 (1)
Type
protein_coding_gene
Location
Chr: 25 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable MAP-kinase scaffold activity. Predicted to be involved in positive regulation of intracellular signal transduction and small GTPase-mediated signal transduction. Predicted to be located in cytoplasm. Predicted to colocalize with actin cytoskeleton. Is expressed in cardiac ventricle. Orthologous to human AKAP13 (A-kinase anchoring protein 13).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With akap13b Human Ortholog
No data available
Associated With akap13b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000219 Dbl homology domain
Domain IPR001849 Pleckstrin homology domain
Domain IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
Domain IPR041020 ARHGEF1-like, PH domain
Family IPR051632 Rho guanine nucleotide exchange factor
Homologous_superfamily IPR011993 PH-like domain superfamily
Homologous_superfamily IPR035899 Dbl homology (DH) domain superfamily
Homologous_superfamily IPR036770 Ankyrin repeat-containing domain superfamily
Homologous_superfamily IPR046349 C1-like domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Ankyrin repeat-containing domain superfamily ARHGEF1-like, PH domain C1-like domain superfamily Dbl homology (DH) domain superfamily Dbl homology domain PH-like domain superfamily Pleckstrin homology domain Protein kinase C-like, phorbol ester/diacylglycerol-binding domain Rho guanine nucleotide exchange factor
UniProtKB:A0A0R4IPD6 InterPro
UniProtKB:A0A0R4IYL3 InterPro
UniProtKB:A0A8M9PVD9 InterPro 2517
UniProtKB:A0A8M9PYU5 InterPro 2552
UniProtKB:A0A8M9P6Q8 InterPro 2512
UniProtKB:A0A8M9PH81 InterPro 1069
UniProtKB:A0A8M3AWE0 InterPro 2553
UniProtKB:A0A8M9PVE3 InterPro 2510
UniProtKB:A0A8M9P6Q4 InterPro 2552
UniProtKB:A0A8M9PH76 InterPro 2552
UniProtKB:A0A8M9PVD2 InterPro 2552
UniProtKB:A0A8M9PYV3 InterPro 2533
UniProtKB:A0A8M9PN49 InterPro 1068
UniProtKB:A0A8M3ANY8 InterPro 1475
UniProtKB:A0A8M9PN43 InterPro 2547
UniProtKB:A0AB32THS5 InterPro 2546
UniProtKB:A0AB32TJN0 InterPro 2511
UniProtKB:A0AC58IXF9 InterPro 2551
UniProtKB:A0AC58IXG0 InterPro 2551
UniProtKB:A0AC58IXG1 InterPro 2551
UniProtKB:A0AC58IXG8 InterPro 2551
UniProtKB:A0AC58IXH0 InterPro 2550
UniProtKB:A0AC58IXH3 InterPro 2550
UniProtKB:A0AC58IXH4 InterPro 2550
UniProtKB:A0AC58IXH5 InterPro 2546
UniProtKB:A0AC58IXH6 InterPro 2545
UniProtKB:A0AC58IXH7 InterPro 2545
UniProtKB:A0AC58IXH8 InterPro 2544
UniProtKB:A0AC58IXH9 InterPro 2544
UniProtKB:A0AC58IXI0 InterPro 2545
UniProtKB:A0AC58IXI1 InterPro 2546
UniProtKB:A0AC58IXI3 InterPro 2545
UniProtKB:A0AC58IXI4 InterPro 2545
UniProtKB:A0AC58IXI5 InterPro 2545
UniProtKB:A0AC58IXI6 InterPro 2546
UniProtKB:A0AC58IXI7 InterPro 2544
UniProtKB:A0AC58IXI9 InterPro 2511
UniProtKB:A0AC58IXJ0 InterPro 2543
UniProtKB:A0AC58IXJ1 InterPro 2505
UniProtKB:A0AC58IXJ2 InterPro 2511
UniProtKB:A0AC58IXJ3 InterPro 2510
UniProtKB:A0AC58IXJ4 InterPro 2505
UniProtKB:A0AC58IXJ5 InterPro 2506
UniProtKB:A0AC58IXJ6 InterPro 2511
UniProtKB:A0AC58IXJ7 InterPro 2509
UniProtKB:A0AC58IXJ8 InterPro 2510
UniProtKB:A0AC58IXJ9 InterPro 2505
UniProtKB:A0AC58IXK0 InterPro 2510
UniProtKB:A0AC58IXK1 InterPro 2510
UniProtKB:A0AC58IXK2 InterPro 2505
UniProtKB:A0AC58IXK3 InterPro 2504
UniProtKB:A0AC58IXK4 InterPro 2504
UniProtKB:A0AC58IXK5 InterPro 2504
UniProtKB:A0AC58IXK6 InterPro 2504
UniProtKB:A0AC58IXK9 InterPro 2504
UniProtKB:A0AC58IXL1 InterPro 2503
UniProtKB:A0AC58IXL2 InterPro 2503
UniProtKB:A0AC58IXL3 InterPro 2468
UniProtKB:A0AC58IXL6 InterPro 2469
UniProtKB:A0AC58IXL7 InterPro 2475
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA akap13-201 (1)
Ensembl
Ensembl 12,679 nt
ZFIN BLAST
mRNA akap13-203 (1)
Ensembl
Ensembl 666 nt
ZFIN BLAST
ncRNA si:dkey-187e18.1-002 (1)
Ensembl
Ensembl 680 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Citations
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