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ZIRC
ZFIN ID: ZDB-GENE-030131-5987
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Gene Name: TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
Gene Symbol: taf5l    Nomenclature History

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Previous Names: fi28g02, wu:fi28g02, zgc:63765

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to localize to the STAGA complex and transcription factor TFTC complex. Orthologous to human TAF5L (TATA-box binding protein associated factor 5 like).
Genome Resources: Alliance (1),  Gene:334055 (1),  Ensembl(GRCz11):ENSDARG00000025808 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63765]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa19609 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH taf5l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH taf5l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component STAGA complex (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680 (1)
  • InterPro:IPR007582 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR017986 (1)
  • InterPro:IPR019775 (1)
  • InterPro:IPR020472 (1)
  • InterPro:IPR036322 (1)
  • InterPro:IPR037264 (1)
  • InterPro:IPR037826 (1)
  • PROSITE:PS00678 (1)
  • PROSITE:PS50082 (1)
  • PROSITE:PS50294 (1)
  • Pfam:PF00400 (1)
  • Pfam:PF04494 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA taf5l-201 (1)    Ensembl 2087
    Select Tool
    ncRNA taf5l-002 (1)    Ensembl 828
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM taf5l No data available
    MARKER RELATIONSHIPS
    taf5l Contained in: [BAC] CH211-52O18 (1) (order this)
    taf5l Encodes: [EST] fi28g02
    [cDNA] MGC:63765 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199852 (1) 2038 bp
    Select Tool
    Genomic GenBank:CU467834 (1) 44491 bp
    Select Tool
    Polypeptide UniProtKB:F1QIA7 (1) 601 aa
    Select Tool
    Sequence Clusters UniGene:80603 (1)
    Sequence Information (all 12)
    ORTHOLOGY for taf5l ( Chr: 1 )
    CITATIONS (19)