ZFIN is now using GRCz12tu for Genomic Data
Gene
ilf3b
- ID
- ZDB-GENE-030131-587
- Name
- interleukin enhancer binding factor 3b
- Symbol
- ilf3b Nomenclature History
- Previous Names
-
- ilf3
- wu:fb37d07
- wu:fb94b02
- zgc:77030
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable double-stranded RNA binding activity; mRNA 3'-UTR AU-rich region binding activity; and single-stranded RNA binding activity. Predicted to be involved in spliceosome-depend formation of circular RNA. Predicted to be located in cytoplasm and nucleolus. Orthologous to human ILF3 (interleukin enhancer binding factor 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR006561 | DZF domain |
| Domain | IPR014720 | Double-stranded RNA-binding domain |
| Domain | IPR033099 | Interleukin enhancer-binding factor 3, first DSRM |
| Domain | IPR049401 | DZF domain, N-terminal |
| Domain | IPR049402 | DZF domain, C-terminal |
| Homologous_superfamily | IPR043519 | Nucleotidyltransferase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Double-stranded RNA-binding domain | DZF domain | DZF domain, C-terminal | DZF domain, N-terminal | Interleukin enhancer-binding factor 3, first DSRM | Nucleotidyltransferase superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AXS5 | InterPro | 566 | ||||||
| UniProtKB:A0A8M2BAZ5 | InterPro | 680 | ||||||
| UniProtKB:A0A8M2BAV0 | InterPro | 823 | ||||||
| UniProtKB:A0A8M2BAW0 | InterPro | 679 | ||||||
| UniProtKB:A0A8M2BB13 | InterPro | 832 | ||||||
| UniProtKB:Q6NXA4 | InterPro | 833 | ||||||
| UniProtKB:A0AB32TBI6 | InterPro | 670 | ||||||
| UniProtKB:A0AB32TEI7 | InterPro | 566 | ||||||
| UniProtKB:A0AB32TEM7 | InterPro | 822 | ||||||
| UniProtKB:A0AB32TGA4 | InterPro | 669 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
ilf3b-205
(1)
|
Ensembl | 801 nt | ||
| mRNA |
ilf3b-201
(1)
|
Ensembl | 780 nt | ||
| mRNA |
ilf3b-202
(1)
|
Ensembl | 3,305 nt | ||
| mRNA |
ilf3b-203
(1)
|
Ensembl | 1,360 nt | ||
| mRNA |
ilf3b-204
(1)
|
Ensembl | 729 nt | ||
| mRNA |
ilf3b-206
(1)
|
Ensembl | 1,124 nt | ||
| mRNA |
ilf3b-207
(1)
|
Ensembl | 5,157 nt |
Interactions and Pathways
No data available
Plasmids
No data available