Gene

snapc4

ID
ZDB-GENE-030131-5794
Name
small nuclear RNA activating complex, polypeptide 4
Symbol
snapc4 Nomenclature History
Previous Names
  • fi18h02
  • si:dkey-1o2.4 (1)
  • si:dkey-1o2.5 (1)
  • wu:fi18h02 (1)
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have DNA binding activity. Involved in intrahepatic bile duct development and pancreas development. Is expressed in brain; digestive system; and head. Orthologous to human SNAPC4 (small nuclear RNA activating complex polypeptide 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
9 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With snapc4 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodevelopmental disorder with motor regression, progressive spastic paraplegia, and oromotor dysfunction 620515
Associated With snapc4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001005 SANT/Myb domain
Domain IPR017884 SANT domain
Domain IPR017930 Myb domain
Family IPR051575 Myb-like DNA-binding
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Myb domain Myb-like DNA-binding SANT domain SANT/Myb domain
UniProtKB:F1QVS5 1561
UniProtKB:I1V1W6 1557
UniProtKB:A0A8M3ASS0 1598
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA snapc4-201 (1) Ensembl 9,947 nt
mRNA snapc4-202 (1) Ensembl 631 nt
mRNA snapc4-203 (1) Ensembl 1,880 nt
mRNA snapc4-204 (1) Ensembl 9,852 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations