ZFIN is now using GRCz12tu for Genomic Data
Gene
scarb2c
- ID
- ZDB-GENE-030131-5789
- Name
- scavenger receptor class B, member 2c
- Symbol
- scarb2c Nomenclature History
- Previous Names
-
- fi18e02
- fj81e10
- wu:fi18e02 (1)
- wu:fj81e10
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable scavenger receptor activity. Predicted to be located in lysosome and membrane. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 4. Orthologous to human SCARB2 (scavenger receptor class B member 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| progressive myoclonus epilepsy 4 | Alliance | Epilepsy, progressive myoclonic 4, with or without renal failure | 254900 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CD36 family | Lysosome membrane protein II |
|---|---|---|---|---|
| UniProtKB:A0AB13A953 | InterPro | 478 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
scarb2c-201
(1)
|
Ensembl | 825 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers