ZFIN is now using GRCz12tu for Genomic Data
Gene
cntn5
- ID
- ZDB-GENE-030131-5640
- Name
- contactin 5
- Symbol
- cntn5 Nomenclature History
- Previous Names
-
- fi09g01
- wu:fi09g01
- zgc:55318
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be located in plasma membrane. Predicted to be active in neuron projection. Is expressed in olfactory pit and telencephalon. Orthologous to human CNTN5 (contactin 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Karuppan et al., 2021
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013098 | Immunoglobulin I-set |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin domain subtype | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q7ZW34 | InterPro | 1056 | ||||||||
| UniProtKB:A0AC58HSN6 | InterPro | 1113 | ||||||||
| UniProtKB:A0AC58HSN7 | InterPro | 1114 | ||||||||
| UniProtKB:A0AC58HSN8 | InterPro | 1092 | ||||||||
| UniProtKB:A0AC58HSN9 | InterPro | 1091 | ||||||||
| UniProtKB:A0AC58HSP2 | InterPro | 1091 | ||||||||
| UniProtKB:A0AC58HSP3 | InterPro | 1055 | ||||||||
| UniProtKB:A0AC58HSP6 | InterPro | 1113 | ||||||||
| UniProtKB:A0AC58HSP9 | InterPro | 1092 | ||||||||
| UniProtKB:A0AC58HSS7 | InterPro | 1092 | ||||||||
| UniProtKB:A0AC58HSW3 | InterPro | 1114 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers