Gene

rpl12

ID
ZDB-GENE-030131-5297
Name
ribosomal protein L12
Symbol
rpl12 Nomenclature History
Previous Names
  • wu:fa27c04
  • wu:fa91d03
  • wu:fb14g09
  • wu:fj26g11
  • zgc:103615
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have large ribosomal subunit rRNA binding activity. Predicted to be involved in ribosomal large subunit assembly and translation. Predicted to localize to cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Is expressed in endodermal cell; eye; intestine; liver; and pancreas. Orthologous to human RPL12 (ribosomal protein L12).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
hi3076TgTransgenic insertionIntron 1UnknownDNA
la024985TgTransgenic insertionUnknownUnknownDNA
sa26510Allele with one point mutationUnknownUnknownENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With rpl12 Human Ortholog
No data available
Associated With rpl12 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020785 Large ribosomal subunit protein uL11, conserved site
Domain IPR020783 Large ribosomal subunit protein uL11, C-terminal
Domain IPR020784 Large ribosomal subunit protein uL11, N-terminal
Family IPR000911 Ribosomal protein uL11
Homologous_superfamily IPR036769 Large ribosomal subunit protein uL11, C-terminal domain superfamily
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Domain Details Per Protein
Protein Length Large ribosomal subunit protein uL11, conserved site Large ribosomal subunit protein uL11, C-terminal Large ribosomal subunit protein uL11, C-terminal domain superfamily Large ribosomal subunit protein uL11, N-terminal Large ribosomal subunit protein uL11, N-terminal domain superfamily Ribosomal protein uL11
UniProtKB:Q7ZUG1 165
UniProtKB:Q6DRE6 165
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 5
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rpl12-201 (1) Ensembl 787 nt
mRNA rpl12-205 (1) Ensembl 523 nt
ncRNA rpl12-002 (1) Ensembl 766 nt
ncRNA rpl12-003 (1) Ensembl 818 nt
ncRNA rpl12-004 (1) Ensembl 569 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRPL129
Conserved genome location (synteny) (1)
Amino acid sequence comparison (2)
MouseRpl122
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
1 - 10 of 16
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