Gene

phf6

ID
ZDB-GENE-030131-5278
Name
PHD finger protein 6
Symbol
phf6 Nomenclature History
Previous Names
  • wu:fa22g03
  • zgc:55403
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Human ortholog(s) of this gene implicated in Borjeson-Forssman-Lehmann syndrome. Orthologous to human PHF6 (PHD finger protein 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Loontiens et al., 2020
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With phf6 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Borjeson-Forssman-Lehmann syndrome Alliance Borjeson-Forssman-Lehmann syndrome 301900
Associated With phf6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001965 Zinc finger, PHD-type
Domain IPR034732 Extended PHD (ePHD) domain
Family IPR051188 PHD-type Zinc Finger Domain-Containing Protein
Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Domain Details Per Protein
Protein Length Extended PHD (ePHD) domain PHD-type Zinc Finger Domain-Containing Protein Zinc finger, FYVE/PHD-type Zinc finger, PHD-type Zinc finger, RING/FYVE/PHD-type
UniProtKB:A0A8M9QKI0 376
UniProtKB:Q803W6 363
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA phf6-201 (1) Ensembl 1,920 nt
mRNA phf6-202 (1) Ensembl 884 nt
mRNA phf6-203 (1) Ensembl 1,123 nt
mRNA phf6-204 (1) Ensembl 810 nt
mRNA phf6-205 (1) Ensembl 926 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations