ZFIN is now using GRCz12tu for Genomic Data
Gene
hmg20a
- ID
- ZDB-GENE-030131-5107
- Name
- high mobility group 20A
- Symbol
- hmg20a Nomenclature History
- Previous Names
-
- fe47h11
- wu:fe47h11
- zgc:162335
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA binding activity. Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Is expressed in telencephalon. Orthologous to human HMG20A (high mobility group 20A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Chromatin Regulation and Neuronal Gene Expression | High mobility group box domain | High mobility group box domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:A3KNQ1 | InterPro | 291 | |||
| UniProtKB:A0A8M2BLH9 | InterPro | 290 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hmg20a-201
(1)
|
Ensembl | 1,478 nt | ||
| mRNA |
hmg20a-202
(1)
|
Ensembl | 836 nt | ||
| mRNA |
hmg20a-203
(1)
|
Ensembl | 1,079 nt | ||
| mRNA |
hmg20a-204
(1)
|
Ensembl | 1,271 nt | ||
| mRNA |
hmg20a-205
(1)
|
Ensembl | 1,107 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers