Gene
slco1d1
- ID
- ZDB-GENE-030131-5044
- Name
- solute carrier organic anion transporter family, member 1D1
- Symbol
- slco1d1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Description
- Enables organic anion transmembrane transporter activity. Acts upstream of or within microcystin transport and organic anion transport. Located in plasma membrane. Is expressed in several structures, including alar plate midbrain region; muscle; nervous system; optic vesicle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in bilirubin metabolic disorder and gastrointestinal stromal tumor. Orthologous to human SLCO1B1 (solute carrier organic anion transporter family member 1B1); SLCO1B3 (solute carrier organic anion transporter family member 1B3); and SLCO1B7 (solute carrier organic anion transporter family member 1B7 (putative)).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 10 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7161333 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Kazal domain | Kazal domain superfamily | Major facilitator superfamily domain | MFS transporter superfamily | Organic anion transporter polypeptide |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PU70 | InterPro | 689 |
1 - 1 of 1
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slco1d1-201
(1)
|
Ensembl | 3,183 nt | ||
| ncRNA |
slco1d1-002
(1)
|
Ensembl | 836 nt |
1 - 2 of 2
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-181N1 | ZFIN Curated Data | |
| Encodes | EST | fe36b05 | ||
| Encodes | EST | IMAGE:7161333 | Thisse et al., 2004 | |
| Encodes | cDNA | MGC:163027 | ZFIN Curated Data |
1 - 4 of 4
Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001348086 (1) | 3187 nt | ||
| Genomic | GenBank:FP236807 (2) | 95768 nt | ||
| Polypeptide | UniProtKB:A0A8M9PU70 (1) | 689 aa |
No data available
- Barthelson, K., Baer, L., Dong, Y., Hand, M., Pujic, Z., Newman, M., Goodhill, G.J., Richards, R.I., Pederson, S.M., Lardelli, M. (2021) Zebrafish Chromosome 14 Gene Differential Expression in the fmr1hu2787 Model of Fragile X Syndrome. Frontiers in genetics. 12:625466
- Marić, P., Ahel, M., Maraković, N., Lončar, J., Mihaljević, I., Smital, T. (2021) Selective interaction of microcystin congeners with zebrafish (Danio rerio) Oatp1d1 transporter. Chemosphere. 283:131155
- Wu, X., Xiong, F., Fang, H., Zhang, J., Chang, M. (2021) Crosstalks between NOD1 and Histone H2A Contribute to Host Defense against Streptococcus agalactiae Infection in Zebrafish. Antibiotics (Basel, Switzerland). 10(7):
- Marić, P., Ahel, M., Babić, O., Simeunović, J., Smital, T. (2020) Ecotoxicological profiling of selected cyanobacterial strains using multi-endpoint effect-directed analysis. Ecotoxicology (London, England). 29(5):535-550
- Annunziato, K.M., Jantzen, C.E., Gronske, M.C., Cooper, K.R. (2019) Subtle morphometric, behavioral and gene expression effects in larval zebrafish exposed to PFHxA, PFHxS and 6:2 FTOH. Aquatic toxicology (Amsterdam, Netherlands). 208:126-137
- Lu, X., Tian, J., Wen, H., Jiang, M., Liu, W., Wu, F., Yu, L., Zhong, S. (2019) Microcystin-LR-regulated transcriptome dynamics in ZFL cells. Aquatic toxicology (Amsterdam, Netherlands). 212:222-232
- Wei, H., Wang, S., Xu, E.G., Liu, J., Li, X., Wang, Z. (2019) Synergistic toxicity of microcystin-LR and Cu to zebrafish (Danio rerio). The Science of the total environment. 713:136393
- Willi, R.A., Fent, K. (2018) Interaction of Environmental Steroids with Organic Anion Transporting Polypeptide (Oatp1d1) in Zebrafish (Danio Rerio). Environmental toxicology and chemistry. 37(10):2670-2676
- Christen, V., Faltermann, S., Brun, N.R., Kunz, P.Y., Fent, K. (2017) Cytotoxicity and molecular effects of biocidal disinfectants (quaternary ammonia, glutaraldehyde, poly(hexamethylene biguanide) hydrochloride PHMB) and their mixtures in vitro and in zebrafish eleuthero-embryos. The Science of the total environment. 586:1204-1218
- Jantzen, C.E., Toor, F., Annunziato, K.A., Cooper, K.R. (2017) Effects of Chronic Perfluorooctanoic Acid (PFOA) at Low Concentration on Morphometrics, Gene Expression, and Fecundity in Zebrafish (Danio rerio). Reproductive toxicology (Elmsford, N.Y.). 69:34-42
1 - 10 of 19
Show