ZFIN Gene: ccdc28a

ZFIN ID: ZDB-GENE-030131-5007

ZFIN ID: ZDB-GENE-030131-5007

Gene Name:

coiled-coil domain containing 28A

Gene Symbol:

ccdc28a Nomenclature History

Previous Names:

wu:fe24b05, zgc:63962

Gene Type:

protein_coding_gene

Location:

Description:

Predicted to have guanyl-nucleotide exchange factor activity. Orthologous to human CCDC28A (coiled-coil domain containing 28A).

Genome Resources:

Alliance (1), Gene:326808 (1), Ensembl(GRCz11):ENSDARG00000091471 (1)

GENE EXPRESSION
All Expression Data:	2 figures from 2 publications
Directly Submitted Expression Data:	1 figure (1 image) from Thisse et al., 2004 [MGC:63962]
Wild-type Stages, Structures:	Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
	unspecified
High Throughput Expression:	GEO (1) , Expression Atlas (1)

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
la027852Tg	Transgenic Insertion	Unknown	Unknown	DNA	Zebrafish International Resource Center (ZIRC) (order this)
sa23127	Point Mutation	Unknown	Unknown	ENU	Zebrafish International Resource Center (ZIRC) (order this)
sa42970	Point Mutation	Unknown	Unknown	ENU	Zebrafish International Resource Center (ZIRC) (order this)

PHENOTYPE No data available

DISEASE ASSOCIATED WITH ccdc28a HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH ccdc28a VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Cellular Component	cellular_component (more)
Molecular Function	guanyl-nucleotide exchange factor activity (more)

GO Terms (all 2)

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS
Type	Name	Length (nt)	Analysis
mRNA	ccdc28a-201 (1)	1279	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	ccdc28a-203 (1)	731	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	ccdc28a-204 (1)	724	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	ccdc28a-205 (1)	735	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ccdc28a-004 (1)	823	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Browsers: UCSC, NCBI, Ensembl, ZFIN

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM ccdc28a No data available

MARKER RELATIONSHIPS

ccdc28a Contained in:	[BAC] CH211-132F19 (1)
ccdc28a Encodes:	[EST] fe24b05, wz1078 (1) [cDNA] MGC:63962 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_199748 (1)	1263 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX323819 (1)	178951 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:F1QUJ5 (1)	956 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

ORTHOLOGY for ccdc28a ( Chr: 17 )

CITATIONS (23)