Gene

ccdc28a

ID

ZDB-GENE-030131-5007

Name

coiled-coil domain containing 28A

Symbol

ccdc28a Nomenclature History

Previous Names

wu:fe24b05
zgc:63962

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Predicted to have guanyl-nucleotide exchange factor activity. Orthologous to human CCDC28A (coiled-coil domain containing 28A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

Thisse Expression Data

MGC:63962 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ccdc28a Human Ortholog

No data available

Associated With ccdc28a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR007858	Dpy-30 motif
Domain	IPR000219	Dbl homology (DH) domain
Domain	IPR001810	F-box domain
Domain	IPR025592	Domain of unknown function DUF4347
Family	IPR025271	Coiled-coil domain-containing protein 28
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR035899	Dbl homology (DH) domain superfamily
Homologous_superfamily	IPR036047	F-box-like domain superfamily

Domain Details Per Protein

Protein	Length	Coiled-coil domain-containing protein 28	Dbl homology (DH) domain	Dbl homology (DH) domain superfamily	Domain of unknown function DUF4347	Dpy-30 motif	F-box domain	F-box-like domain superfamily	PH-like domain superfamily
UniProtKB:E9QJM5 InterPro	184
UniProtKB:Q7T3C8 InterPro	180
UniProtKB:F1QUJ5 InterPro	956
UniProtKB:E9QFQ6 InterPro	181
UniProtKB:X1WDF0 InterPro	892
UniProtKB:F1QD64 InterPro	180

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	ccdc28a-201 (1) Ensembl	1279 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ccdc28a-203 (1) Ensembl	731 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ccdc28a-204 (1) Ensembl	724 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ccdc28a-205 (1) Ensembl	735 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ccdc28a-004 (1) Ensembl	823 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations