Gene

lrrc42

ID
ZDB-GENE-030131-4992
Name
leucine rich repeat containing 42
Symbol
lrrc42 Nomenclature History
Previous Names
  • wu:fe17g08
  • zgc:56446 (1)
  • zgc:77847
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Orthologous to human LRRC42 (leucine rich repeat containing 42).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa15849Allele with one point mutationUnknownPremature StopENU
sa18299Allele with one point mutationUnknownSplice SiteENU
1 - 2 of 2
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Sequence Targeting Reagents
No data available
Human Disease
Associated With lrrc42 Human Ortholog
No data available
Associated With lrrc42 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR039631 Leucine-rich repeat-containing protein 42
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
1 - 3 of 3
Domain Details Per Protein
Protein Length Leucine-rich repeat Leucine-rich repeat-containing protein 42 Leucine-rich repeat domain superfamily
UniProtKB:Q6P5J6 407
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 2
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lrrc42-201 (1) Ensembl 1,537 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-181M9ZFIN Curated Data
EncodesESTfe17g08
EncodescDNAMGC:56446ZFIN Curated Data
EncodescDNAMGC:77847ZFIN Curated Data
1 - 4 of 4
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanLRRC421
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseLrrc424
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
1 - 2 of 2
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