Gene

cbx1a

ID
ZDB-GENE-030131-4945
Name
chromobox homolog 1a (HP1 beta homolog Drosophila)
Symbol
cbx1a Nomenclature History
Previous Names
  • cbx1 (1)
  • wu:fe14b09
  • zgc:55739
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to localize to nucleus. Is expressed in brain and retina. Orthologous to human CBX1 (chromobox 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cbx1a Human Ortholog
No data available
Associated With cbx1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR023779 Chromo domain, conserved site
Domain IPR000953 Chromo/chromo shadow domain
Domain IPR008251 Chromo shadow domain
Domain IPR017984 Chromo domain subgroup
Domain IPR023780 Chromo domain
Family IPR051219 Heterochromatin-associated chromo domain-containing protein
Homologous_superfamily IPR016197 Chromo-like domain superfamily
Domain Details Per Protein
Protein Length Chromo/chromo shadow domain Chromo domain Chromo domain, conserved site Chromo domain subgroup Chromo-like domain superfamily Chromo shadow domain Heterochromatin-associated chromo domain-containing protein
UniProtKB:F1QM86 212
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cbx1a-201 (1) Ensembl 2,448 nt
mRNA cbx1a-202 (1) Ensembl 263 nt
mRNA cbx1a-203 (1) Ensembl 642 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations