Gene

ssbp4

ID

ZDB-GENE-030131-469

Name

single stranded DNA binding protein 4

Symbol

ssbp4 Nomenclature History

Previous Names

ssbp
si:ch211-202n20.1
wu:fb33f07 (1)

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to enable single-stranded DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to several human genes including SSBP3 (single stranded DNA binding protein 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ssbp4 Human Ortholog

No data available

Associated With ssbp4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR006594	LIS1 homology motif
Family	IPR008116	Sequence-specific single-strand DNA-binding protein

Domain Details Per Protein

Protein	Additional Resources	Length	LIS1 homology motif	Sequence-specific single-strand DNA-binding protein
UniProtKB:F1QSI6	InterPro	386

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ssbp4-201 (1) Ensembl	Ensembl		5,747 nt	Select Tool ZFIN BLAST
mRNA	ssbp4-202 (1) Ensembl	Ensembl		2,685 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations