Gene

trim8b

ID
ZDB-GENE-030131-4325
Name
tripartite motif containing 8b
Symbol
trim8b Nomenclature History
Previous Names
  • trim8
  • si:ch211-208d15.5
  • wu:fc90g07 (1)
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to enable metal ion binding activity. Located in nucleus. Is expressed in central nervous system; retina; and trigeminal placode. Orthologous to human TRIM8 (tripartite motif containing 8).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Micale et al., 2012
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With trim8b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Focal segmental glomerulosclerosis and neurodevelopmental syndrome 619428
1 - 1 of 1
Associated With trim8b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR001841 Zinc finger, RING-type
Family IPR051051 E3 ubiquitin-protein ligase TRIM/RNF
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
1 - 4 of 4
Domain Details Per Protein
Protein Additional Resources Length E3 ubiquitin-protein ligase TRIM/RNF Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:B7ZVP9 InterPro 564
UniProtKB:Q1MTE4 InterPro 564
1 - 2 of 2
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA trim8b-201 (1) Ensembl 4,037 nt
mRNA trim8b-202 (1) Ensembl 329 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations