Gene

pkp1b

ID
ZDB-GENE-030131-417
Name
plakophilin 1b
Symbol
pkp1b Nomenclature History
Previous Names
  • pkp1
  • fb30d08
  • wu:fb30d08
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have cadherin binding activity. Predicted to be involved in cell-cell adhesion and cell-cell junction assembly. Predicted to localize to several cellular components, including adherens junction; nucleus; and plasma membrane. Human ortholog(s) of this gene implicated in ectodermal dysplasia. Is expressed in EVL; otic vesicle; peripheral olfactory organ; and pharyngeal arch. Orthologous to human PKP1 (plakophilin 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pkp1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Ectodermal dysplasia/skin fragility syndrome 604536
Associated With pkp1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR028435 Plakophilin/Delta catenin
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR016024 Armadillo-type fold
Repeat IPR000225 Armadillo
Domain Details Per Protein
Protein Length Armadillo Armadillo-like helical Armadillo-type fold Plakophilin/Delta catenin
UniProtKB:E7FBR0 736
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pkp1b-201 (1) Ensembl 2,833 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations