Gene

usp16

ID
ZDB-GENE-030131-4153
Name
ubiquitin specific peptidase 16
Symbol
usp16 Nomenclature History
Previous Names
  • wu:fc76b02
  • wu:fc76b08
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have several functions, including peptidase activity; transcription coactivator activity; and zinc ion binding activity. Predicted to be involved in several processes, including histone H2A K63-linked deubiquitination; positive regulation of macromolecule biosynthetic process; and protein homotetramerization. Predicted to localize to nucleus. Orthologous to human USP16 (ubiquitin specific peptidase 16).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With usp16 Human Ortholog
No data available
Associated With usp16 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018200 Ubiquitin specific protease, conserved site
Domain IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Domain IPR001607 Zinc finger, UBP-type
Domain IPR028889 Ubiquitin specific protease domain
Family IPR030849 Ubiquitin carboxyl-terminal hydrolase 16
Family IPR050185 Ubiquitin carboxyl-terminal hydrolase
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR038765 Papain-like cysteine peptidase superfamily
Domain Details Per Protein
Protein Length Papain-like cysteine peptidase superfamily Peptidase C19, ubiquitin carboxyl-terminal hydrolase Ubiquitin carboxyl-terminal hydrolase Ubiquitin carboxyl-terminal hydrolase 16 Ubiquitin specific protease, conserved site Ubiquitin specific protease domain Zinc finger, RING/FYVE/PHD-type Zinc finger, UBP-type
UniProtKB:A8HAL1
UniProtKB:A0A8M3AQ52 814
UniProtKB:A0A8M9QHB9 741
UniProtKB:A0A8M9QC36 815
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA usp16-201 (1) Ensembl 3,660 nt
mRNA usp16-202 (1) Ensembl 746 nt
mRNA usp16-203 (1) Ensembl 488 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations