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ZIRC
ZFIN ID: ZDB-GENE-030131-4017
Gene Name: NOP2/Sun RNA methyltransferase 2
Gene Symbol: nsun2
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: wu:fc65a08, zgc:55517

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have tRNA (cytosine-5-)-methyltransferase activity and tRNA binding activity. Predicted to be involved in tRNA methylation. Predicted to localize to the cytoplasm and nucleus. Human  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55517]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb340 Small Deletion Exon 3 Unknown CRISPR
ihb341 Indel Exon 3 Unknown CRISPR
sa3016 Point Mutation Unknown Premature Stop ENU
sa14653 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15958 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36858 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43300 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nsun2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal recessive non-syndromic intellectual disability Mental retardation, autosomal recessive 5 611091
    DISEASE ASSOCIATED WITH nsun2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process methylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function methyltransferase activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA nsun2-002 (1) 563
    mRNA nsun2-202 (1) 2893
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nsun2 No data available
    MARKER RELATIONSHIPS
    nsun2 Contained in: [BAC] DKEY-56D18 (1) (order this)
    nsun2 Encodes: [EST] fc65a08
    [cDNA] MGC:55517 (1) (order this), MGC:191743 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199711 (1) 2905 bp
    Genomic GenBank:BX511155 (1) 205235 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A5PMI3 (1) 766 aa
    Sequence Clusters UniGene:119317 (1)
    Sequence Information (all 18)
    ORTHOLOGY for nsun2 ( Chr: 19 )
    CITATIONS (21)