ZFIN is now using GRCz12tu for Genomic Data
Gene
sephs1
- ID
- ZDB-GENE-030131-3670
- Name
- selenophosphate synthetase 1
- Symbol
- sephs1 Nomenclature History
- Previous Names
-
- wu:fc49b09
- zgc:55304
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein heterodimerization activity; protein homodimerization activity; and selenide, water dikinase activity. Predicted to be involved in selenocysteine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be located in nuclear membrane and plasma membrane. Predicted to be active in cytoplasm. Orthologous to human SEPHS1 (selenophosphate synthetase 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR010918 | PurM-like, C-terminal domain |
| Domain | IPR016188 | PurM-like, N-terminal domain |
| Family | IPR004536 | Selenophosphate synthetase |
| Homologous_superfamily | IPR036676 | PurM-like, C-terminal domain superfamily |
| Homologous_superfamily | IPR036921 | PurM-like, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | PurM-like, C-terminal domain | PurM-like, C-terminal domain superfamily | PurM-like, N-terminal domain | PurM-like, N-terminal domain superfamily | Selenophosphate synthetase |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q7ZW38 | InterPro | 392 | |||||
| UniProtKB:A0AB32TA65 | InterPro | 392 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sephs1-201
(1)
|
Ensembl | 2,113 nt | ||
| mRNA |
sephs1-202
(1)
|
Ensembl | 717 nt | ||
| mRNA |
sephs1-203
(1)
|
Ensembl | 1,182 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers