Gene

rprd1b

ID
ZDB-GENE-030131-355
Name
regulation of nuclear pre-mRNA domain containing 1B
Symbol
rprd1b Nomenclature History
Previous Names
  • fb23h08
  • un-named hi3400
  • unm hi3400
  • wu:fb23h08
  • zgc:55687 (1)
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have RNA polymerase II complex binding activity. Predicted to be involved in mRNA 3'-end processing. Predicted to localize to RNA polymerase II, holoenzyme. Orthologous to human RPRD1B (regulation of nuclear pre-mRNA domain containing 1B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rprd1b Human Ortholog
No data available
Associated With rprd1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006569 CID domain
Domain IPR032337 RPRD1A/B, C-terminal domain
Domain IPR047882 RPRD1B, CID domain
Homologous_superfamily IPR008942 ENTH/VHS
Domain Details Per Protein
Protein Length CID domain ENTH/VHS RPRD1A/B, C-terminal domain RPRD1B, CID domain
UniProtKB:A0A8M2B9C0 330
UniProtKB:A0A8M2B9C1 336
UniProtKB:Q7ZUK9 335
UniProtKB:A0A8M2B9L5 331
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rprd1b-201 (1) Ensembl 1,816 nt
mRNA rprd1b-202 (1) Ensembl 787 nt
mRNA rprd1b-203 (1) Ensembl 4,151 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations