ZFIN is now using GRCz12tu for Genomic Data
Gene
papola
- ID
- ZDB-GENE-030131-3507
- Name
- poly(A) polymerase alpha
- Symbol
- papola Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable poly(A) RNA polymerase activity. Predicted to act upstream of or within RNA 3'-end processing and mRNA processing. Predicted to be active in nucleus. Orthologous to several human genes including PAPOLA (poly(A) polymerase alpha).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7139044 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR007010 | Poly(A) polymerase, RNA-binding domain |
| Domain | IPR007012 | Poly(A) polymerase, central domain |
| Domain | IPR048840 | Poly(A) polymerase, nucleotidyltransferase domain |
| Family | IPR014492 | Poly(A) polymerase |
| Homologous_superfamily | IPR011068 | Nucleotidyltransferase, class I-like, C-terminal |
| Homologous_superfamily | IPR043519 | Nucleotidyltransferase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotidyltransferase, class I-like, C-terminal | Nucleotidyltransferase superfamily | Poly(A) polymerase | Poly(A) polymerase, central domain | Poly(A) polymerase, nucleotidyltransferase domain | Poly(A) polymerase, RNA-binding domain |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q5SNY2 | InterPro | 723 | ||||||
| UniProtKB:A0A8M2B770 | InterPro | 724 | ||||||
| UniProtKB:A0A8M3AT08 | InterPro | 704 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
papola-201
(1)
|
Ensembl | 1,559 nt | ||
| mRNA |
papola-202
(1)
|
Ensembl | 3,471 nt | ||
| mRNA |
papola-204
(1)
|
Ensembl | 1,610 nt | ||
| mRNA |
papola-205
(1)
|
Ensembl | 639 nt | ||
| mRNA |
papola-206
(1)
|
Ensembl | 710 nt | ||
| ncRNA |
papola-003
(1)
|
Ensembl | 570 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers