Gene

pabpc1a

ID
ZDB-GENE-030131-3238
Name
poly(A) binding protein, cytoplasmic 1a
Symbol
pabpc1a Nomenclature History
Previous Names
  • pabpc1
  • wu:fb16a02
  • wu:fc31e01
  • wu:fi19b08
  • wu:fj12d09
  • wu:fj61f06
  • zgc:109879
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to enable mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Acts upstream of or within heart development. Predicted to be located in cytoplasm. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasmic stress granule; cytosol; and nucleus. Is expressed in several structures, including central nervous system; digestive system; eye; pectoral fin bud; and ventral mesenchyme. Orthologous to several human genes including PABPC1 (poly(A) binding protein cytoplasmic 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from 5 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pabpc1a Human Ortholog
No data available
Associated With pabpc1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR002004 Polyadenylate-binding protein/Hyperplastic disc protein
Domain IPR003954 RNA recognition motif domain, eukaryote
Family IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Homologous_superfamily IPR036053 PABC (PABP) domain
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily PABC (PABP) domain Polyadenylate binding protein, human types 1, 2, 3, 4 Polyadenylate-binding protein/Hyperplastic disc protein RNA-binding domain superfamily RNA recognition motif domain RNA recognition motif domain, eukaryote
UniProtKB:F1QB54 634
Transcripts
Genome Browsers
Interactions and Pathways
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations