Gene

hmga2

ID
ZDB-GENE-030131-3148
Name
high mobility group AT-hook 2
Symbol
hmga2 Nomenclature History
Previous Names
  • wu:fc27f12
  • wu:fc28f02
  • wu:fc57d12
  • zgc:77719
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Predicted to have DNA-(apurinic or apyrimidinic site) endonuclease activity. Predicted to be involved in base-excision repair and regulation of transcription, DNA-templated. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in leiomyoma; lipoma; ovarian cancer; and uterine fibroid. Is expressed in several structures, including cardiovascular system; head; nervous system; pectoral fin bud; and pronephric duct. Orthologous to human HMGA2 (high mobility group AT-hook 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Wang et al., 2021
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hmga2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Silver-Russell syndrome 5 618908
Associated With hmga2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000637 HMG-I/HMG-Y, DNA-binding, conserved site
Conserved_site IPR017956 AT hook, DNA-binding motif
Family IPR000116 High mobility group protein HMGA
Domain Details Per Protein
Protein Length AT hook, DNA-binding motif High mobility group protein HMGA HMG-I/HMG-Y, DNA-binding, conserved site
UniProtKB:Q6P038 110
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hmga2-201 (1) Ensembl 1,415 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations