ZFIN is now using GRCz12tu for Genomic Data
Gene
slc6a6b
- ID
- ZDB-GENE-030131-3077
- Name
- solute carrier family 6 member 6b
- Symbol
- slc6a6b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables taurine:sodium symporter activity. Acts upstream of or within taurine transmembrane transport. Predicted to be located in membrane. Predicted to be active in cell projection and plasma membrane. Is expressed in several structures, including blastomere; cardiovascular system; nervous system; optic vesicle; and presumptive neural retina. Orthologous to human SLC6A6 (solute carrier family 6 member 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Kozlowski et al., 2008
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Hypotaurinemic retinal degeneration and cardiomyopathy | 145350 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Sodium:neurotransmitter symporter | Sodium:neurotransmitter symporter superfamily | Sodium:neurotransmitter symporter, taurine |
|---|---|---|---|---|---|
| UniProtKB:Q2VRP7 | InterPro | 625 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc6a6b-201
(1)
|
Ensembl | 1,725 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers