Gene

snrpa

ID
ZDB-GENE-030131-2841
Name
small nuclear ribonucleoprotein polypeptide A
Symbol
snrpa Nomenclature History
Previous Names
  • fc19d01
  • wu:fc19d01
  • zgc:77810 (1)
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Predicted to have U1 snRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to U1 snRNP. Human ortholog(s) of this gene implicated in connective tissue disease. Orthologous to human SNRPA (small nuclear ribonucleoprotein polypeptide A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With snrpa Human Ortholog
No data available
Associated With snrpa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034407 U1 small nuclear ribonucleoprotein A, RNA recognition motif 1
Domain IPR034409 U1 small nuclear ribonucleoprotein A, RNA recognition motif 2
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain U1 small nuclear ribonucleoprotein A, RNA recognition motif 1 U1 small nuclear ribonucleoprotein A, RNA recognition motif 2
UniProtKB:Q6P2T1 281
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA snrpa-201 (1) Ensembl 1,533 nt
mRNA snrpa-202 (1) Ensembl 842 nt
mRNA snrpa-203 (1) Ensembl 734 nt
mRNA snrpa-204 (1) Ensembl 1,285 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations