cnot6a

ID

ZDB-GENE-030131-2768

Name

CCR4-NOT transcription complex, subunit 6a

Symbol

cnot6a Nomenclature History

Previous Names

cnot6
wu:fa03c11
wu:fc17f01
zgc:65822 (1)

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable 3'-5'-RNA exonuclease activity. Predicted to act upstream of or within regulatory ncRNA-mediated gene silencing. Predicted to be located in cytoplasm and nucleus. Orthologous to human CNOT6 (CCR4-NOT transcription complex subunit 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:65822 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cnot6a Human Ortholog

No data available

Associated With cnot6a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR005135	Endonuclease/exonuclease/phosphatase
Family	IPR050410	CCR4/nocturin mRNA turnover and transcription
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Homologous_superfamily	IPR036691	Endonuclease/exonuclease/phosphatase superfamily
Repeat	IPR001611	Leucine-rich repeat
Repeat	IPR003591	Leucine-rich repeat, typical subtype